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Understanding Proteins: A Complete Protein Bioinformatics Analysis Workshop

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About Course

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It is important to analyze proteins to understand their biological importance and functions such as:

  • How two proteins interact with each other to perform their function(s).

  • What are their physiochemical properties, such as molecular weight, half-life and etc.

  • What are the important functional sites and regions of the proteins.

  • Which residues play the role in protein-protein interactions.

  • Which biologically important compounds have better binding affinity with the target protein.

  • What are the important domains present in the protein-of-interest and how these domains interact with other domains.

  • Which protein databases are available and what sort of protein data can be retrieved from them.

In this pre-recorded, pre-scheduled and pre-outlined ​Understanding Proteins – A Complete Workshop of Protein Bioinformatics Analysis. You’ll be learning a huge set of Bioinformatics skills that can help you with your Bioinformatics analysis and research, you’ll be learning and practicing Protein Bioinformatics skills through our pre-recorded workshop.

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What Will You Learn?

  • Protein Databases
  • Basic and Primary Protein Analysis
  • Secondary Structure Prediction & Analysis
  • 3D Structure Prediction, Validation, Evaluation, Alignment (Superimposing) and Analysis
  • Molecular Docking and Virtual Screening
  • Molecular Dynamics and Simulation

Course Content

Segment 1: Bioinformatics Databases for Protein Analysis

  • Introduction to UniProt
    09:56
  • UniProtKB & Protein Analysis
    39:30
  • UniProteome & Retreieval of an Entire Proteome
    13:05
  • UniRef & Retrieve Protein Clusters
    11:36
  • UniParc & Find the Non-Redundant Entries
    04:59
  • Peptide Search: Searching for a Particular Peptide on UniProt
    03:15
  • Introduction to Protein Data Bank (PDB)
    06:45
  • Accurately Searching for a Protein Structure on PDB & Protein Analysis
    13:56
  • Browsing PDB According to Annotation
    06:52
  • Digging Out Categorized & Specific Protein Structures from PDB Archives
    06:23
  • 3D Structure Visualization on PDB
    10:49
  • Biological Annotation and Protein Features View & Analysis
    08:18
  • Protein Symmetry: Understanding the Protein Validation
    02:34
  • NCBI BLAST Database Searching
    25:37
  • UniProt BLAST & Protein Database Searching
    12:33
  • Introduction to InterPro
    04:10
  • STRING: Protein-Protein Network Database and Analyzing PPI Between Proteins
    13:17
  • Introduction to Molecular Modeling Database
    08:07
  • InterPro – Protein Family Classifcation and Analysis
    14:35
  • Protein & Protein Domain Analysis
    09:29
  • Pfam: Understanding Protein Families and their Members
    15:56
  • PROSITE: Understanding and Analyzing Protein Motif and Domain Profiles
    13:46

Segment 2: Protein Sequence Alignment & Analysis

Segment 3: 3D Structure Prediction

Segment 4: 3D Structure Visualization & Evaluation

Segment 5: Molecular Docking and Docking Complex Evaluation

Segment 6: Molecular Dynamics & Simulation

Evaluation

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Student Ratings & Reviews

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O
2 years ago
The modules were enlightening and easy to follow. It's a good work totally put together by the team.

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