Advanced Bioinformatics Scripting in Python, BioPython, R & BioConductor

Admin

About This Course

Advanced Bioinformatics Scripting in Python, BioPython, R & BioConductor course also incorporates the following courses:

Writing short scripts & programs and developing softwares for various biological data analysis such as Sequences Alignment and Analysis, Genome Analysis, Proteome Analysis, Phylogenetic Analysis, Biological data visualization, MicroArray gene expression analysis, etc, requires a great deal of understanding of biological programming languages and how to utilize such programming languages to write the scripts.

In this course you’ll learn from the very basics of biological programming in Python, BioPython & R to an advanced level understanding of Bioinformatics Scripting, even if you lack prior knowledge. Understand various concepts related to how to write programs for MicroArray Gene Expression Analysis, ggplot2 biological data visualization & sequence retrieval, alignment, BLAST database searching & phylogenetic analysis in BioPython. You’ll also be learning complete end-to-end Linux (BASH) for Bioinformatics.

Joining and learning from the Advanced Bioinformatics Scripting in Python, BioPython, R & BioConductor can intensify your biological programming career by learning through various useful & informative pre-recorded lectures on various biological programming/scripting languages.

Learning Objectives

Introduction
Iterable Objects
Control Flow
File Handling
Functions & Modules
Error Handling
Sequence Analysis
Sequence Data Parsing
Sequence Data Extraction
Alignment Parsing and Analysis
BLAST Database Searching
Parsing BLAST results
Biological Data Retrieval
Parsing a PDB Structure file
Phylogenetic Analysis
Protein Sequence Analysis
Variables & Functions
Packages
Vectors & Data Types
Biological Data Analysis
Data Visualization: ggplot2
Getting Familiar With Linux
Piping and Control Data Flow
Pre-processing Biological Datasets
Processing and Analysis of Biological Datasets
BioConductor
Sequence Retrieval
Bioinformatics File Parsing and Writing
Sequence Alignment
Database Searching
Gene Enrichment Analysis
Data Transformation with dplyr
Tidy Data with tidyr
MicroArray Analysis: BioConductor

Target Audience

  • The target audience for the Advanced Bioinformatics Scripting in Python, BioPython, R &BioConductor course are biologists, beginner or intermediate Bioinformaticians or data analysts with no or little experience in Bioinformatics scripting and programming.
  • However, a superficial understanding of logic development for coding is expected from you before you join the course.
  • Bioinformatics is quite easy to get started in, even if you lack a proper understanding of the underlying concepts of Bioinformatics databases, servers, tools and the algorithms working behind them.

Curriculum

151 Lessons23h 30m

Python

Why Python in Bioinformatics9:16
Introduction to Python and it’s Installation8:25
Comments5:43
Basic Input and output15:38
Mathematical Operations7:20
Strings21:51
Dictionaries10:57
Lists28:48
Lists(pt 2) and Tuples10:38
Sets7:36
If-Else9:19
For Loop and Calculation of Molecular Weight of Proteins10:56
While Loop and Biological Data Analysis9:37
CSV (A special kind of file in Bioinformatics)8:42
Reading Files00:13:45
Writing Files00:07:18
Consolidate (merge) multiple DNA and Protein Sequences into one FASTA file00:09:25
OS Module00:31:47
Function26:41
With00:08:50
Error Handling00:15:31

BioPython

R

Linux

Evaluation

Write a review

$139.99$199.99

30% off
Level
All Levels
Duration 23.5 hours
Lectures
151 lectures
Language
English

Material Includes

  • Step-by-step pre-recorded lectures
  • Learn any time, any where!
  • Transcription
  • Notes
  • Coding scripts
  • BioPresentations
  • Exercises
  • Automated Evaluations (MCQs)
  • 100% Authentic Certificate

Enrolment validity: 365 days

Select the fields to be shown. Others will be hidden. Drag and drop to rearrange the order.
  • Image
  • SKU
  • Rating
  • Price
  • Stock
  • Availability
  • Add to cart
  • Description
  • Content
  • Weight
  • Dimensions
  • Additional information
  • Attributes
  • Custom attributes
  • Custom fields
Click outside to hide the compare bar
Compare
Wishlist 0
Open wishlist page Continue shopping