Machine Learning for Bioinformatics Courses

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Free

COVID-19 Genomic Research Training

5 Lessons
Intermediate
What you'll learn
Introduction to Genomes & Genomes
Introduction to Genome Browsers
Genome Retrieval
Genome Visualization
Genome Analysis

Functional Enrichment Analysis (Gene Ontology, KEGG Pathways Analysis, Protein-Protein Interaction) Using Webservers and R Scripting

4 Lessons
1.2 hour
Beginner
What you'll learn
Introduction to Functional Enrichment Analysis
In-depth Knowledge of webservers and R package for Functional Enrichment Analysis
Gene Ontology Analysis
KEGG Pathways Analysis
PANTHER Pathways Analysis
Protein-Protein Interaction Using STRING
ENRICHR
TopGO

Command-line Based Practical RNA-Seq Data Analysis With Linux & R (Subscription)

57 Lessons
7 hours
All Levels
What you'll learn
Introduction to RNA-Seq, NGS
In-depth Knowledge of R & Linux
Command-line tools for RNA-Seq
Quality Control and Trimming
Mapping & Evaluation of Alignment
Discovering DEGs with DESeq2, edgeR and Ballgown
Functional Analysis with Gene Ontology & KEGG Pathways

Advanced Bioinformatics Scripting in Python, BioPython, R & BioConductor (Subscription)

151 Lessons
23.5 hours
All Levels
What you'll learn
Introduction
Iterable Objects
Control Flow
File Handling
Functions & Modules
Error Handling
Sequence Analysis
Sequence Data Parsing
Sequence Data Extraction
Alignment Parsing and Analysis
BLAST Database Searching
Parsing BLAST results
Biological Data Retrieval
Parsing a PDB Structure file
Phylogenetic Analysis
Protein Sequence Analysis
Variables & Functions
Packages
Vectors & Data Types
Biological Data Analysis
Data Visualization: ggplot2
Getting Familiar With Linux
Piping and Control Data Flow
Pre-processing Biological Datasets
Processing and Analysis of Biological Datasets
BioConductor
Sequence Retrieval
Bioinformatics File Parsing and Writing
Sequence Alignment
Database Searching
Gene Enrichment Analysis
Data Transformation with dplyr
Tidy Data with tidyr
MicroArray Analysis: BioConductor

Advanced Bioinformatics Course (Subscription)

149 Lessons
47.6 hours
All Levels
What you'll learn
NCBI
Sequence Format
UCSC
UniProt
UCSC
PDB
ENSEMBL
InterPro
Phytozome
Pairwise Sequence Alignment & Analysis
Multiple Sequence Alignment & Analysis
Alignment Format
Sequence Analysis
Phylogenetic Analysis
Phylogenetic Tree Visualization & Analysis
Secondary Structure Prediction
Protein Analysis
Protein Family Database
Motif & Domain
Analysis
3D Structure Prediction
3D Structure Visualization
3D Structure Evaluation
Molecular Docking
Docking Complex Evaluation
Gene Prediction
PPI Database
Genomics Tools
Molecular Dynamics Simulations: GROMACS
Vaccine Development

Command-line Series Advanced Linux Scripting For Bioinformatics (Subscription)

38 Lessons
16.4 hours
Intermediate
What you'll learn
Getting Familiar With Linux
Piping and Control Data Flow
Processing and Analysis of
Biological Datasets
Molecular Dynamics
Simulations: GROMACS
Featured

Molecular Biology MasterClass

43 Lessons
All Levels
What you'll learn
Basics of Cellular Biology
Genetic Information and Its Flow
Brief Introduction to Genome and Model Organism
Cell Metabolism and Energy Production
Protein Structure, Shape and Characteristics
Chromsomes & Their Characteristics
Evolutionary & Mutation Rates
DNA Replication

Advanced Bioinformatician Course (Subscription)

354 Lessons
50.3 hours
All Levels
What you'll learn
NCBI
Sequence Format
UCSC
UniProt
PDB
ENSEMBL
InterPro
Phytozome
Pairwise Sequence Alignment & Analysis
Multiple Sequence Alignment & Analysis
Alignment Format
Sequence Analysis
Phylogenetic Analysis
Phylogenetic Tree Visualization & Analysis
Secondary Structure Prediction
Protein Analysis
Protein Family Database
Motif & Domain Analysis
3D Structure Prediction
3D Structure Visualization
3D Structure Evaluation
Molecular Docking
Docking Complex Evaluation
Gene Prediction
PPI Database
Genomic Tools
Molecular Dynamics Simulation
Molecular Dynamics Simulations: GROMACS
Vaccine Development
Introduction to Python
Iterable Objects
Control Flow
File Handling
Functions & Modules
Error Handling
Introduction to BioPython
Sequence Analysis in BioPython
Sequence Data Parsing
Sequence Data Extraction
Alignment Parsing and Analysis
BLAST Database Searching
Parsing BLAST results
Biological Data Retrieval
Parsing a PDB Structure file
Phylogenetic Analysis in BioPthon
R
Linux

Bioinformatics MasterClass (Subscription)

154 Lessons
Beginner
What you'll learn
Introduction to Bioinformatics
Bioinformatics Databases
Sequence Analysis and Alignment
Scoring Matricies
Multiple Sequence Alignment
Databases Searching
DNA & Protein Analysis
Protein & Gene Families
Gene Prediction
Regulatory Elements
Evolution and Phylogenetic Trees
Concepts of Phylogenetic Trees Contrusction
Phylogenetic Models
Construction of Phylogenetic Trees
Introduction to Structural Bioinformatics
Structural Features of Proteins
Determination of Structures of Proteins
Protein Structure Databases & Formats
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